Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800091.1_cds_XP_016468016.1_6024
CDS Infomation

[gene=LOC107790573] [db_xref=GeneID:107790573] [protein=serrate RNA effector molecule-like isoform X2] [protein_id=XP_016468016.1] [location=join(33662..34098,37451..37563,39817..39874,43606..43680,43839..43913,43993..44040,44211..44279,44365..45168,45251..45299,47270..47547,47656..47835,49997..50057)] [gbkey=CDS]
Sequence

ATGGCCGAAGTAATGGACGTTCCGGCAGACGGCTTAGAGCGCCGCCGTGACCGTGAACGA
AGTAAAGAGAACAATTCCGTCGAAGATCCGCCGGCATCTTCTCCGCCTCCTCCTCCTCCG
CCGCCGAGGCGCGGCCGCGACAGAGATTCACGGGAACGGAGAGACGACAGAGATTTTGAT
CGCCGAGGTGGTCGTGGGGACTATTATGACCGTAACCGGTCTCCTCCTCCACCTCTTCGA
GAACGGGAGTACAAACGTGGACGGCCTAGTCCTAGCCCTCCTCCTCCTCTTCCTCCTTAT
CGAGACCGCCGTGGTGGATATTCTCCTCCTCACCGCCGTTCGCCTCCGTTTCCACCTTAT
AAGCGCTCGCGTAGAGATGACTATGATGGCGGCCGCCGTGGAAGCCCTAGAGGTGGTTTC
GGGCACGGTGATCGAAGATTTGGTTATGACTATCAACCCGGTTATGAGCGTGAGATGGGG
GGTAGACCTGGTTATCCTGATGAGAGGCGTCACGGACGATTCGCAGGCCGCTCGGCTGGT
GGCTATCGAGACTGGGGGAAAGGCCGGGGAGGCTTTGCAGATACTTTCGGCACAGGGAGC
AGTCAAAGAGAGGGATTGAAATCTTATAAGCAATTCATTCAGGAGCTTGAAGATGATATT
TTGCCAGCTGAAGCTGAGCGCAGGTACCAAGAATACAAGTGTGGGTATATAGAAGCACAA
AAAAGAGCTTATTTTAATGCACATAAAAATGAAGAATGGTTGAAGGACAAATACCATCCC
ACAAACTTAATTTCTGTTATTGAAAGGAGGAATGAGCTCGCAAGGAAATTGGCGAAGGAT
TTCCTACTTGATTTGCAGAGTGGAACTGTAGACATAGGTCCTGGTGTTACACCTGCTTCT
GCAAACAAGTCAGGGCAGTCAAGTGACCCAAATTCTGACGAAGAAGCCGATGAAGGTGGG
AAAAGGAGGCGGCATGGGAGGGGACCCACTAAAGAAACTGATTTACTTTCAGCTGCTCCA
AAGGCTCACCAAGTTAGTTCTGATCCCAGAAGAGTCCAGATTGATGTTGAACAAGCACAG
GCACTTGTGAGGAAGCTTGACTCAGAGAAAGGAATAGAGGATAACATATTATCTCGATCT
GATAATGATAGGGGAGGCAGAGACAAATCGCATGGTTCCTCTGGCCCTGTTATTATCATA
AGGGGCTTAACTTCAGTAAAAGGTCTCGAGGGAACTGAGCTGCTTGATACGCTTCTAACC
TATCTGTGGCGCATTCACGGGGTGGATTATTATGGCACGACAGAGACAAATGAAGCTAAG
GGTCTTCGGCACGTGAGAGTGGATGGCGGCAAGACTTCTGATGCAACAAGCAGTGGAGTA
GAATGGGAAACAAAACTAGATTCGCATTGGCAAGACAGGCTGAAGGGTCAGGATCCTTTG
GAGCTAATGGCTGCAAAAGAAAAAATTGATGCAGCTGCTGCTGAAGCCTTAGATCCGTAT
GTACGTAAGATTAGGGATGAGAAGTATGGCTGGAAATATGGTTGTGGAGCCAAGGGTTGT
ACAAAGCTCTTCCATGCTGCCGAATTTGTCCATAAACATTTAAAGTTGAAACACCCTGAT
CTGGCAGTGGATGTTACTACTAAAGTGCGTGAAGATTTGTACTTCCAGAACTATATGAAT
GATGAAAATGCTCCTGGTGGGACTCCTGTAATGCTGCCATCTATGCCGATAGAGAAGCCA
CTAAGGCGCCGGCCTGGGCTAGATGGCCGACTGAAGGATGACAGAGGTAGCCGTAGAGAT
CGTGATGGTCGAGCTAATGGTGGTGAAAGGTTTGATTTGTCTGACAACCCAAAATCTGGG
GATTTTCAATCTAATAATGATGGTGCCAGTGGGGGAAATCCTGATGAAGAAATGTTTGAT
ACTTTTGGCGGACAAGGGATCCCAGTTGCTCCTTTCCCTTCAGACATGGCTCCTCCACCA
GTGTTGATGCCTGTTCCTGGAGCTGGTCCTCTTGGGCCTTTTATTCCCGCGCCTCCTGAT
GTTGCAATGCGGATGATGCGAGAACAAGGAGGCCCTGGTCCTTTTGAAGGTGGTAGAAAT
GGGATGTCTGGGCCTGCAATAAGTGGGGGGGCCCCGATAATTGCTTTACCTCCCGGATTT
CGGCAGGATCCTCGTCGTTTGCGAAGCTATCAAGATCTTGATGCACCTGAAGATGAAGTT
ACTGTAATAGACTACAGGAGTTTGTAG

Peptide Sequence

PEP ID

XP_016468016.1
PEP Infomation

PREDICTED: serrate RNA effector molecule-like isoform X2 [Nicotiana tabacum]
Sequence

MAEVMDVPADGLERRRDRERSKENNSVEDPPASSPPPPPPPPRRGRDRDSRERRDDRDFD
RRGGRGDYYDRNRSPPPPLREREYKRGRPSPSPPPPLPPYRDRRGGYSPPHRRSPPFPPY
KRSRRDDYDGGRRGSPRGGFGHGDRRFGYDYQPGYEREMGGRPGYPDERRHGRFAGRSAG
GYRDWGKGRGGFADTFGTGSSQREGLKSYKQFIQELEDDILPAEAERRYQEYKCGYIEAQ
KRAYFNAHKNEEWLKDKYHPTNLISVIERRNELARKLAKDFLLDLQSGTVDIGPGVTPAS
ANKSGQSSDPNSDEEADEGGKRRRHGRGPTKETDLLSAAPKAHQVSSDPRRVQIDVEQAQ
ALVRKLDSEKGIEDNILSRSDNDRGGRDKSHGSSGPVIIIRGLTSVKGLEGTELLDTLLT
YLWRIHGVDYYGTTETNEAKGLRHVRVDGGKTSDATSSGVEWETKLDSHWQDRLKGQDPL
ELMAAKEKIDAAAAEALDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPD
LAVDVTTKVREDLYFQNYMNDENAPGGTPVMLPSMPIEKPLRRRPGLDGRLKDDRGSRRD
RDGRANGGERFDLSDNPKSGDFQSNNDGASGGNPDEEMFDTFGGQGIPVAPFPSDMAPPP
VLMPVPGAGPLGPFIPAPPDVAMRMMREQGGPGPFEGGRNGMSGPAISGGAPIIALPPGF
RQDPRRLRSYQDLDAPEDEVTVIDYRSL

Transcript Sequence

Gene sequence data has not been registered.